Display Data: Displays images, volumes, or 1D plots.

Usage in command line:

e2display.py  input_data_list  --classmx=CLASSMX  --classes=CLASSES  --pdb=PDB  --singleimage  --plot  --plot3  --fullrange  --newwidget  --ppid=PPID  --verbose=n

• Browser window with more flexible functionality

e2display.py

• Display images

e2display.py input_image1 input_image2 ...

e2display exists in non-MPI version.

input_data_list

Input files - List of input images, volumes, plots. Wild cards (e.g *) can be used to select a list of files. Not recommended when the list is too large. (default none)

classmx

Show particles from a class - Shows particles in one class defined in a classification matrix. The options requires <classmx>,<#>. (default none)

classes

show class-averages associated with particles:Shows particles associated class averages. Requires <rawptcl>,<classmx>. (default none)

pdb

Show PDB structure: (default none)

singleimage

Single image view: Displays a stack in a single image view: (default False)

plot

Plot 2D: Data file(s) should be plotted rather than displayed in 2D. (default False)

plot3

Plot 3D: Data file(s) should be plotted rather than displayed in 3D. (default False)

fullrange

Skip auto-contrast: Disables the auto contrast for the display of particles stacks and 2D images. (default False)

newwidget

Use new 3D widget: Highly recommended. (default False)

ppid

Set PPID: Set PPID of the process. (default -2)

verbose

Verbose: Accepted values 0-9. (default 0)

e2display is a flexible program to display a wide variety of data types. The options listed above are the ones used by SPHIRE. For a description of e2display as a standalone application, please visit its EMAN2 wiki page

EMAN2 Group

category 1:: APPLICATIONS

e2display.py

None.