Prepare installation for different queueing systems

On this page, we try to provide information about how to install SPHIRE for different queueing systems.

If you find your system missing, feel free to provide us with information!

SGE

Should work out of the box.

PBS/Torque

Change to the openmpi recipe directory

cd <path to EMAN2 directory>/recipes/openmpi

Create a copy of the file build.sh

cp build.sh build_bkp.sh

Open the file build.sh with the editor of your choice and change the line

--disable-dlopen

to

--disable-dlopen \

Now add another line after the previous line

--with-tm=/path/to/your/torque/installation/

The /path/to/your/torque/installation/ placeholder is an absolute path to the torque installation directory on your machine.

For example:

/cm/shared/apps/torque/5.1.0/

Now save the file build.sh and continue with the installation instructions.