Approvals: 0/1The Previously approved version (2019/09/20 08:34) is available.

crYOLO
No longer maintained. See pip archive https://pypi.org/project/cryolo/#history
crYOLO boxmanager
No longer maintained. See pip archive https://pypi.org/project/cryoloBM/#history
General PhosaursNet model
Version 201909
Number of datasets: 40 real, 10 simulated, 10 particle free datasets on various grids with contamination
cryo (low-pass): DOWNLOAD
cryo (janni): DOWNLOAD
Version 20190516
38 real, 10 simulated, 10 particle free datasets on various grids with contamination
cryo (low-pass): DOWNLOAD
Config is the same as in version 20191221.
cryo (janni): DOWNLOAD
{ "model" : { "architecture": "PhosaurusNet", "input_size": 1024, "anchors": [205,205], "max_box_per_image": 700, "num_patches": 1, "filter": ["gmodel_janni_20190703.h5",24,3,"tmp_filtered_nn"] } }
Version 20190314
DOWNLOAD (Uploaded: 14. March 2019) Number of datasets: 32 real, 10 simulated, 10 particle free datasets on various grids with contaminations.
Config is the same as in version 20191221.
Version 20190218
DOWNLOAD (Uploaded: 18. February 2019) Number of datasets: 30 real, 10 simulated, 10 particle free datasets on various grids with contaminations
Config is the same as in version 20191221.
Version 20191221
DOWNLOAD (Uploaded: 21. December 2018) Number of datasets: 27 (real), 10 simulated, 10 particle free datasets on various grids
- config.json
{ "model" : { "architecture": "PhosaurusNet", "input_size": 1024, "anchors": [205,205], "max_box_per_image": 700, "num_patches": 1, "filter": [0.1,"tmp_filtered"] } }
General model YOLO patched mode
Version 20181127
DOWNLOAD (Uploaded: 27. November 2018) Number of datasets: 27 (real), 10 simulated, 10 particle free datasets on various grids
- config.json
{ "model" : { "architecture": "YOLO", "input_size": 1024, "anchors": [205,205], "overlap_patches": 200, "max_box_per_image": 700, "num_patches": 2, "filter": [0.1,"tmp_filtered"] } }
Version 20180823
DOWNLOAD (Uploaded: 23. August 2018) Number of real handpicked datasets included: 25 (+8 particle free datasets on various grids)
Compatible config:
- config.json
{ "model" : { "architecture": "YOLO", "input_size": 768, "anchors": [205,205], "max_box_per_image": 600, "overlap_patches": 200, "num_patches": 3 } }
Version 20180720
DOWNLOAD (Uploaded: 20. July 2018) Number of real handpicked datasets included: 20
Compatible config:
- config.json
{ "model" : { "architecture": "YOLO", "input_size": 1024, "anchors": [205,205], "max_box_per_image": 600, "num_patches": 2 } }
Version 20180704
DOWNLOAD (Uploaded: 04. July 2018) Number of real handpicked datasets included: 14
Compatible config:
- config.json
{ "model" : { "architecture": "YOLO", "input_size": 768, "anchors": [160,160], "max_box_per_image": 600, "num_patches": 2 } }
Version 20180621
General crYOLO network model
Number of real handpicked datasets included: 10
Uploaded: 28. June 2018
- config.json
{ "model" : { "architecture": "crYOLO", "input_size": 1024, "anchors": [160,160], "max_box_per_image": 600 } }
Info: Trained on cryo images, therefore negative stain will not work.