pipeline:window:start

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pipeline:window:start [2019/04/02 11:37]
lusnig
pipeline:window:start [2019/04/02 11:40] (current)
lusnig
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 === Commands === === Commands ===
-  ; [[sp_cryolo_predict|crYOLO - predict]] : insert+  ; [[sp_cryolo_predict|crYOLO - predict]] : Prediction with crYOLO, a deep learning high accuracy particle picking procedure
   ; [[sxwindow|Particle Extraction]] : Extract particle images from micrographs using particle coordinates files.   ; [[sxwindow|Particle Extraction]] : Extract particle images from micrographs using particle coordinates files.
   ; [[pipeline:​utilities:​e2bdb|Particle Stack]] : Combine BDB image stacks of individual micrographs to a single virtual stack of all particles. ​   ; [[pipeline:​utilities:​e2bdb|Particle Stack]] : Combine BDB image stacks of individual micrographs to a single virtual stack of all particles. ​
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   ; [[pipeline:​utilities:​sxpipe_restacking|Restacking]] : Generates the information necessary to create a new stack from an exiting one.   ; [[pipeline:​utilities:​sxpipe_restacking|Restacking]] : Generates the information necessary to create a new stack from an exiting one.
   ; [[sxrewindow|Particle reextraction]] : Rewindows particles based on rebox files.   ; [[sxrewindow|Particle reextraction]] : Rewindows particles based on rebox files.
-  ; [[sp_cryolo_train|crYOLO - training]] : insert+  ; [[sp_cryolo_train|crYOLO - training]] : Training of crYOLO, a deep learning high accuracy particle picking procedure
     ​     ​
 \\ \\
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   ; [[pipeline:​utilities:​e2display|Display Data]] : Displays images, volumes, or 1D plots.   ; [[pipeline:​utilities:​e2display|Display Data]] : Displays images, volumes, or 1D plots.
   ; [[pipeline:​utilities:​sxpipe_organize_micrographs|Organize Micrographs/​Movies]] : Move selected micrographs/​movies from source to destination directory.   ; [[pipeline:​utilities:​sxpipe_organize_micrographs|Organize Micrographs/​Movies]] : Move selected micrographs/​movies from source to destination directory.
-  ; [[sp_cryolo_boxmanager|crYOLO - boxmanager]] : insert +  ; [[sp_cryolo_boxmanager|crYOLO - boxmanager]] : Displays boxfiles on images. Allows creation of new training data for crYOLO 
-  ; [[pipeline:​utilities:​sp_batch|Batch Pipeline Execution]] : insert comment+  ; [[pipeline:​utilities:​sp_batch|Batch Pipeline Execution]] : Run jobs that wait with the execution on each other
  
  • pipeline/window/start.txt
  • Last modified: 2019/04/02 11:40
  • by lusnig