https://sphire.mpg.de/wiki/ 2026-05-06T08:41:59+00:00 https://sphire.mpg.de/wiki/ https://sphire.mpg.de/wiki/lib/tpl/dokuwiki/images/favicon.ico text/html 2021-02-15T14:03:04+00:00 Anonymous (anonymous@undisclosed.example.com) https://sphire.mpg.de/wiki/doku.php?id=howto:download_latest&rev=1613394184&do=diff text/html 2018-06-20T14:09:45+00:00 Anonymous (anonymous@undisclosed.example.com) https://sphire.mpg.de/wiki/doku.php?id=howto:download_latest_cryolo&rev=1529496585&do=diff text/html 2018-06-20T14:09:15+00:00 Anonymous (anonymous@undisclosed.example.com) https://sphire.mpg.de/wiki/doku.php?id=howto:download_latest_transphire&rev=1529496555&do=diff text/html 2018-06-20T13:12:13+00:00 Anonymous (anonymous@undisclosed.example.com) https://sphire.mpg.de/wiki/doku.php?id=howto:faq&rev=1529493133&do=diff Frequently Asked Questions text/html 2018-06-20T13:12:13+00:00 Anonymous (anonymous@undisclosed.example.com) https://sphire.mpg.de/wiki/doku.php?id=howto:mailinglist&rev=1529493133&do=diff SPHIRE mailing list Stay up-to-date and ask questions to which you do not find an answer on this Wiki with our SPHIRE mailing list. You can subscribe to the list via <https://listserv.gwdg.de/mailman/listinfo/sphire> You will also be able to browse the mailing list archive in order to find questions that have been already asked. text/html 2018-06-20T13:12:13+00:00 Anonymous (anonymous@undisclosed.example.com) https://sphire.mpg.de/wiki/doku.php?id=howto:preparesubmission&rev=1529493133&do=diff Prepare installation for different queueing systems On this page, we try to provide information about how to install SPHIRE for different queueing systems. If you find your system missing, feel free to provide us with information! SGE Should work out of the box. text/html 2018-06-20T13:12:13+00:00 Anonymous (anonymous@undisclosed.example.com) https://sphire.mpg.de/wiki/doku.php?id=howto:relion2sphire&rev=1529493133&do=diff Import a star file into SPHIRE In many cases, the best possible results are obtained by combining the strength of several independent packages. For instance, you might want to import you old data into SPHIRE or you simply use the powerful ISAC to sort your images. text/html 2019-10-01T12:42:39+00:00 Anonymous (anonymous@undisclosed.example.com) https://sphire.mpg.de/wiki/doku.php?id=howto:sphire_helical&rev=1569926559&do=diff How to use SPHIRE Helical --- Before you start the processing helical data, you have to switch to the Helical version of SPHIRE. You can do that in the general settings area or start the GUI with sphire --helical. You will notice that the logo in the lower left corner changes: text/html 2019-06-25T19:09:57+00:00 Anonymous (anonymous@undisclosed.example.com) https://sphire.mpg.de/wiki/doku.php?id=howto:submissions&rev=1561482597&do=diff Submit a cluster job from the GUI Most SPHIRE jobs require heavy computing and are most suited for a cluster environment, although all SPHIRE pipeline commands now support a workstation (or a single node system) since Beta Patch 1 release (sphire_beta_20170602). text/html 2018-08-20T17:42:24+00:00 Anonymous (anonymous@undisclosed.example.com) https://sphire.mpg.de/wiki/doku.php?id=howto:tutorials&rev=1534779744&do=diff