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start [2021/02/18 19:26]
twagner 		start [2021/02/19 10:17]
twagner
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 ===== Short application info ===== ===== Short application info =====
  
-===     :icons:icon_settings_64.png?direct&72 Project  ===+| \\ [[:pipeline:project:start|Projects]] \\   \\  Main project settings, such as name, pixel, and particles sizes.|{{  :icons:icon_settings_64.png?nolink&64x64}}| 
 +| \\ **Cter** \\  \\ CTF estimation and graphical evaluation tool.|{{  :icons:icon_ctf_64.png?nolink&64x64}}| 
 +| \\ **Window** \\  \\ Particle picking and extraction.|{{  :icons:icon_window_few_64.png?nolink&64x64}}| 
 +| \\ **ISAC** \\  \\ Reproducible class average calculation.|{{  :icons:icon_isac_plus_few_64.png?nolink&64x64}}| 
 +| \\ **Viper** \\  \\ Reproducible //ab initio// model calculation.|{{  :icons:icon_viper6_darkerlines_64.png?nolink&64x64}}| 
 +| \\ **Meridien** \\  \\ Automatic high-resolution 3D refinement.|{{  :icons:icon_meridien_darkerline_64.png?nolink&64x64}}| 
 +| \\ **Sort3D** \\  \\ Reproducible 3D clustering.|{{  :icons:icon_sort3d_64.png?nolink&64x64}}| 
 +| \\ **Subtract** \\  \\ Signal subtraction.|{{  :icon_subtract_64.png?nolink&64x64}}| 
 +| \\ **LocalRes** \\  \\ Real-space local resolution calculation.|{{  :icons:icon_localres_64.png?nolink&64x64}}| 
 +| \\ **Movie** \\  \\ Movie frame alignment with [[http://grigoriefflab.janelia.org/unblur|Unblur]] and drift evaluation tools.|{{  :icons:icon_movie_64.png?nolink&64x64}}| 
 +| \\ **Utilities** \\  \\ Tools and scripts to make your life easier.|{{  :icons:icon_utilities2_64.png?nolink&64x64}}|
  
-Main project settings, such as name, pixel, and particles sizes. <WRAP clear /> +|
- +
-<WRAP left 10%> [[:pipeline:cter:start|{{  :icons:icon_ctf_64.png?nolink&72}}]] </WRAP> +
- +
-=== Cter === +
- +
-CTF estimation and graphical evaluation tool. <WRAP clear /> +
- +
-<WRAP left 10%> [[:pipeline:window:start|{{  :icons:icon_window_few_64.png?nolink&72}}]] </WRAP> +
- +
-=== Window === +
- +
-Particle picking and extraction. <WRAP clear /> +
- +
-<WRAP left 10%> [[:pipeline:isac:start|{{  :icons:icon_isac_plus_few_64.png?nolink&72}}]] </WRAP> +
- +
-=== Isac === +
- +
-Reproducible class average calculation. <WRAP clear /> +
- +
-<WRAP left 10%> [[:pipeline:viper:start|{{  :icons:icon_viper6_darkerlines_64.png?nolink&72}}]] </WRAP> +
- +
-=== Viper === +
- +
-Reproducible //ab initio// model calculation. <WRAP clear /> +
- +
-<WRAP left 10%> [[:pipeline:meridien:start|{{  :icons:icon_meridien_darkerline_64.png?nolink&72}}]] </WRAP> +
- +
-=== Meridien === +
- +
-Automatic high-resolution 3D refinement. <WRAP clear /> +
- +
-<WRAP left 10%> [[:pipeline:sort3d:start|{{  :icons:icon_sort3d_64.png?nolink&72}}]] </WRAP> +
- +
-=== Sort3D === +
- +
-Reproducible 3D clustering. <WRAP clear /> +
- +
-<WRAP left 10%> [[:pipeline:subtract:start|{{  :icon_subtract_64.png?nolink&72}}]] </WRAP> +
- +
-=== Subtract === +
- +
-Signal subtraction. <WRAP clear /> +
- +
-<WRAP left 10%> [[:pipeline:localres:start|{{  :icons:icon_localres_64.png?nolink&72}}]] </WRAP> +
- +
-=== LocalRes === +
- +
-Real-space local resolution calculation. <WRAP clear /> +
- +
-<WRAP left 10%> [[:pipeline:movie:start|{{  :icons:icon_movie_64.png?nolink&72}}]] </WRAP> +
- +
-=== Movie (Optional) === +
- +
-Movie frame alignment with [[http://grigoriefflab.janelia.org/unblur|Unblur]] and drift evaluation tools. <WRAP clear /> +
- +
-<WRAP left 10%> [[:pipeline:utilities:start|{{  :icons:icon_utilities2_64.png?nolink&72}}]] </WRAP> +
- +
-=== Utilities === +
- +
-Tools and scripts to make your life easier. <WRAP clear /> +
- +
-</WRAP>+
  
  
start.txt · Last modified: 2021/02/19 10:26 by twagner

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