pipeline:window:cryolo:picking_filaments
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pipeline:window:cryolo:picking_filaments [2019/09/19 15:44] twagner [3. Configuration] |
pipeline:window:cryolo:picking_filaments [2019/11/15 17:57] shaikh |
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| Let's assume you want to pick a filament with a width of 100 pixels (-fw 100). The box size is 200x200 and you want a 90% overlap (-bd 20). Moreover, you wish that each filament has at least 6 boxes (-mn 6). The micrographs are in the '' | Let's assume you want to pick a filament with a width of 100 pixels (-fw 100). The box size is 200x200 and you want a 90% overlap (-bd 20). Moreover, you wish that each filament has at least 6 boxes (-mn 6). The micrographs are in the '' | ||
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| - | cryolo_predict.py -c cryolo_config.json -w cryolo_model.h5 -i full_data --filament -fw 100 -bd 20 -o boxes/ -g 0 -mn 6 | + | cryolo_predict.py -c config_cryolo.json -w cryolo_model.h5 -i full_data --filament -fw 100 -bd 20 -o boxes/ -g 0 -mn 6 |
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pipeline/window/cryolo/picking_filaments.txt ยท Last modified: 2020/06/05 09:04 by twagner
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