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pipeline:isac:start [2018/06/20 13:12]
127.0.0.1 external edit
pipeline:isac:start [2021/02/22 14:09]
fschoenfeld
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 ===== ISAC ===== ===== ISAC =====
  
-=== Commands == +=== Commands ===
-  ; [[sxisac2|ISAC2 2D Clustering]] : Iterative Stable Alignment and Clustering (ISAC). +
-  ; [[sxcompute_isac_avg|Beautifier - Adjust to Model]] : Generation of class averages in full pixel size and adjust the power spectrum to an analytical model. +
-  ; [[sxpipe_isac_substack|ISAC2 Stack Subset]] : Create virtual subset stack consisting from ISAC2 accounted particles.+
  
-\\ +; [[:pipeline:isac:sxisac2|ISAC2 2D Clustering]] : : Iterative Stable Alignment and Clustering (ISAC). ; ; [[:pipeline:isac:sxcompute_isac_avg|ISAC2 2D Clustering]] : : GPU accelerated ISAC for single machines; [[:pipeline:isac:sxcompute_isac_avg|Beautifier]] : Generation of class averages in full pixel size and adjust the power spectrum by user-specified method; [[:pipeline:isac:sxpipe_isac_substack|ISAC2 Stack Subset]] : : Create virtual subset stack consisting from ISAC2 accounted particles.
-=== Alternatives === +
-  ; [[sxcompute_isac_avg|Beautifier - No Adjust]] : Generation of class averages in full pixel size without any power spectrum adjustment. +
-  ; [[sxcompute_isac_avg|Beautifier - Adjust to Rot. Avgs.]] : Generation of class averages in full pixel size and adjust the power spectrum to the user-provided reference. +
-  ; [[sxcompute_isac_avg|Beautifier - Adjust to B-factor]] : Generation of class averages in full pixel size and adjust the power spectrum using B-factor.+
  
-\\ 
 === Utilities === === Utilities ===
-  ; [[pipeline:utilities:e2display|Display Data]] : Displays images, volumes, or 1D plots.+ 
 +; [[:pipeline:utilities:e2bdb|Create Virtual Stack]] : : insert the new link too ; ; [[:pipeline:utilities:sp_separate_class|Separate Into Classes]] : : Separates stacks of particle images into stacks for each class. ; ; [[:pipeline:utilities:e2display|Display Data]] : Displays images, volumes, or 1D plots. ; ; [[:pipeline:utilities:sp_batch|Batch Pipeline Execution]] : : Run jobs that wait with the execution on each other 
  
pipeline/isac/start.txt · Last modified: 2021/02/22 14:32 by fschoenfeld