pipeline:window:cryolo:picking
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pipeline:window:cryolo:picking [2019/09/14 10:14] twagner |
pipeline:window:cryolo:picking [2019/09/16 16:48] twagner |
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| - | You can now use the model weights file (//e.g. '' | + | You can now use the model weights file (//e.g. '' |
| < | < | ||
| - | cryolo_predict.py -c config.json -w model.h5 -i full_data/ -g 0 -o boxfiles/ | + | cryolo_predict.py -c config.json -w cryolo_model.h5 -i full_data/ -g 0 -o boxfiles/ |
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| If you want to pick less conservatively or more conservatively you might want to change the selection threshold from the default of 0.3 to a less conservative value like 0.2 or more conservative value like 0.4 using the //-t// parameter: | If you want to pick less conservatively or more conservatively you might want to change the selection threshold from the default of 0.3 to a less conservative value like 0.2 or more conservative value like 0.4 using the //-t// parameter: | ||
| < | < | ||
| - | cryolo_predict.py -c config.json -w model.h5 -i full_data/ -g 0 -o boxfiles/ -t 0.2 | + | cryolo_predict.py -c config.json -w cryolo_model.h5 -i full_data/ -g 0 -o boxfiles/ -t 0.2 |
| </ | </ | ||
| However, it is much easier to select the best threshold after picking using the '' | However, it is much easier to select the best threshold after picking using the '' | ||
pipeline/window/cryolo/picking.txt ยท Last modified: 2020/05/17 11:04 by twagner
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