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pipeline:isac:start

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pipeline:isac:start [2018/02/21 17:09]
moriya 		pipeline:isac:start [2021/02/22 14:32]
fschoenfeld
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 === Commands == === Commands ==
-  ; [[sxisac2| ISAC2 2D Clustering]] : Iterative Stable Alignment and Clustering (ISAC). +  ; [[sxisac2|ISAC2 2D Clustering]] : Iterative Stable Alignment and Clustering (ISAC). 
-  ; [[sxcompute_isac_avg| Beautifier - Adjust to Model]] : Generation of class averages in full pixel size and adjust the power spectrum to an analytical model. +  ; [[:gpu_isac|GPU ISAC2]] : GPU-accelerated version of ISAC2 to run on single machines. 
-  ; [[sxpipe_isac_substack| ISAC2 Stack Subset]] : Create virtual subset stack consisting from ISAC2 accounted particles. +  ; [[sxcompute_isac_avg|Beautifier]] : Generation of class averages in full pixel size and adjust the power spectrum by user-specified method. 
- +  ; [[sxpipe_isac_substack|ISAC2 Stack Subset]] : Create virtual subset stack consisting from ISAC2 accounted particles.
-\\ +
-=== Alternatives === +
-  ; [[sxcompute_isac_avg| Beautifier - No Adjust]] : Generation of class averages in full pixel size without any power spectrum adjustment. +
-  ; [[sxcompute_isac_avg| Beautifier - Adjust to Rot. Avgs.]] : Generation of class averages in full pixel size and adjust the power spectrum to the user-provided reference. +
-  ; [[sxcompute_isac_avg| Beautifier - Adjust to B-factor]] : Generation of class averages in full pixel size and adjust the power spectrum using B-factor.+
  
 \\ \\
 === Utilities === === Utilities ===
-  ; [[:pipeline:utilities:e2display| Display Data]] : Displays images, volumes, or 1D plots.+  ; [[pipeline:utilities:e2bdb|Create Virtual Stack]] : insert the new link too 
 +  ; [[pipeline:utilities:sp_separate_class|Separate Into Classes]] : Separates stacks of particle images into stacks for each class. 
 +  ; [[pipeline:utilities:e2display|Display Data]] : Displays images, volumes, or 1D plots. 
 +  ; [[pipeline:utilities:sp_batch|Batch Pipeline Execution]] : Run jobs that wait with the execution on each other
  
pipeline/isac/start.txt · Last modified: 2021/02/22 14:32 by fschoenfeld

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