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auto_2d_class_selection [2020/03/10 13:28] twagner [Pretrained model (2D classes)] |
auto_2d_class_selection [2020/08/27 11:57] twagner [Cinderella] |
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====== 2D class selection model ====== | ====== 2D class selection model ====== | ||
- | Our model was trained on a set of 2D classes from ISAC. During the creation of the training dataset, I tried to ask myself "Which class would I select If I would not know the particle?" | + | Our model was trained on a set of 2D classes from ISAC and Relion. During the creation of the training dataset, I tried to ask myself "Which class would I select If I would not know the particle?" |
{{ :: | {{ :: | ||
- | <note important> | + | |
- | The training dataset does **not contain any Relion classes**, so it might be that Cinderella will not work with well them. | + | |
- | </ | + | |
You can easily [[auto_2d_class_selection# | You can easily [[auto_2d_class_selection# | ||
- | Right now our model is trained on **20 datasets**. But we will increase the number often! | + | Right now our model is trained on **4773 good classes and 5390 bad classes**. |
====== Download ====== | ====== Download ====== | ||
====Cinderella==== | ====Cinderella==== | ||
- | Version: 0.6.0 | + | Version: 0.7.0 |
- | Uploaded: | + | Uploaded: |
[[https:// | [[https:// | ||
====Pretrained model (2D classes)==== | ====Pretrained model (2D classes)==== | ||
- | Uploaded: | + | Uploaded: |
[[ftp:// | [[ftp:// | ||
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====Changelog==== | ====Changelog==== | ||
+ | |||
+ | === Version 0.7 === | ||
+ | * Now uses a circular masks by default. This allows to use full rotation during data augmentation. Can be deactivated by setting the field " | ||
+ | * The general models now includes 300 new good Relion classes and 2000 new bad Relion classes (Thanks to Grigory Shariv). | ||
+ | * Fix numerical instability that occur when you have classes filled with a constant value (Thanks to Grigory Sharov). | ||
+ | * Fix a problem with classes that contain NaN values. NaN values are now replaced with 0. (Thanks to Grigory Sharov). | ||
=== Version 0.6 === | === Version 0.6 === |