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sxproj_compare [2019/03/19 13:43]
shaikh [sxproj_compare]
sxproj_compare [2019/03/19 13:50] (current)
shaikh
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   ; outdir : Directory where outputs will be written. (default required string)   ; outdir : Directory where outputs will be written. (default required string)
   ; %%--%%mode : Comparison method. Choices are: viper, projmatch, and meridien. (default viper)   ; %%--%%mode : Comparison method. Choices are: viper, projmatch, and meridien. (default viper)
-  ; %%--%%classangles : VIPER mode -- parameters ​containing projection angles. Not required if the projection parameters are stored in the header of the input images, which for ISAC2 is generally not the case. In RVIPER, this file is of the form main003/​run002/​rotated_reduced_params.txt. This file is not required if the angles have already been written to the header.+  ; %%--%%classangles : VIPER mode -- Parameters ​containing projection angles. Not required if the projection parameters are stored in the header of the input images, which for ISAC2 is generally not the case. In RVIPER, this file is of the form main003/​run002/​rotated_reduced_params.txt. This file is not required if the angles have already been written to the header.
   ; %%--%%classselect : VIPER mode -- Input selection containing list of images to be included from the input stack. ​ For instance, RVIPER, if it finds a stable solution, may exclude some images, and thus their projection angles will be excluded from the parameters file.  The file containing the list of included images will have a name like main003/​index_keep_image.txt.   ; %%--%%classselect : VIPER mode -- Input selection containing list of images to be included from the input stack. ​ For instance, RVIPER, if it finds a stable solution, may exclude some images, and thus their projection angles will be excluded from the parameters file.  The file containing the list of included images will have a name like main003/​index_keep_image.txt.
   ; %%--%%delta : ProjMatch mode -- Angular-sampling for reference projections.   ; %%--%%delta : ProjMatch mode -- Angular-sampling for reference projections.