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pipeline:window:cryolo:visualize

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pipeline:window:cryolo:visualize [2020/03/12 16:58]
twagner
pipeline:window:cryolo:visualize [2020/03/12 17:04]
twagner
Line 8: Line 8:
 **The following does not yet work for filaments**. **The following does not yet work for filaments**.
 </note> </note>
-CrYOLO writes cbox files in a separate ''CBOX'' folder. You can import these into the box manager which enables a slider in the GUI that allows you to change the confidence threshold and see the results in a live preview. You can then write the new box selection into new box file.+CrYOLO writes cbox files in a separate ''CBOX'' folder. Those files contains besides the particles more information like the confidence and the estimated size of each particle. When importing .cbox files into the box manager, it enables more filtering options in the GUI. You can plot size- and confidence distributions. Moreover, you can change the confidence threshold, minimum and maximum size and see the results in a live preview. If you are done with the filtering, you can then write the new box selection into new box files. The video below shows an example.
  
 [{{ :pipeline:window:cryolo:cryolo_size_adjustment_5.gif?400 |This example shows how to filter particle boxes using the crYOLO boxmanager. It is an animated GIF. Click on it to see it playing.}}] [{{ :pipeline:window:cryolo:cryolo_size_adjustment_5.gif?400 |This example shows how to filter particle boxes using the crYOLO boxmanager. It is an animated GIF. Click on it to see it playing.}}]
pipeline/window/cryolo/visualize.txt ยท Last modified: 2020/03/18 08:35 by twagner