pipeline:window:cryolo:picking_scratch []

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<note important>

**DOCUMENTATION OUTDATED**

The documentation has moved to https://cryolo.readthedocs.io

</note>

===== Picking particles - Using a model trained for your data =====
This tutorial explains you how to train a model specific for you dataset.

If you followed the installation instructions, you now have to activate the cryolo virtual environment with

<code>
source activate cryolo
</code>
==== 1. Data preparation ====
{{page>pipeline:window:cryolo:data_preparation}}

==== 2. Start crYOLO ====
{{page>pipeline:window:cryolo:start_cryolo}}

==== 3. Configuration ====

{{page>pipeline:window:cryolo:configuration}}

<html>
<div style="background-color: #cfc ; padding: 10px; border: 1px solid green;"> 
<b>&#9658; You can now press the [Start] button to create your configuration file.</b>
</div>
</html>

<html>
<div style="background-color: LightCyan ; padding: 10px; border: 1px solid Black;"> 
<b>Alternative: Create the configuration file with the commmand line</b>
</div>
</html>
{{page>pipeline:window:cryolo:configuration_cmdl_normal}}
<html>
<div style="background-color: LightCyan ; padding: 10px; border: 1px solid Black;"> 
<b> </b>
</div>
</html>



==== 4. Training ====

{{page>pipeline:window:cryolo:training}}
==== 5. Picking ====
{{page>pipeline:window:cryolo:picking}}


==== 6. Visualize the results ====
{{page>pipeline:window:cryolo:visualize}}

==== 7. Evaluate your results ====
{{page>pipeline:window:cryolo:evaluate_results}}

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