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pipeline:window:cryolo:evaluate_results

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pipeline:window:cryolo:evaluate_results [2019/09/19 15:51]
twagner
pipeline:window:cryolo:evaluate_results [2019/09/21 00:43]
twagner
Line 26: Line 26:
 </html> </html>
  
-The html file you specified as out looks like this:+<html> 
 +<div style="background-color: LightCyan ; padding: 10px; border: 1px solid Black;">  
 +<b>Alternative: Run evaluation from the command line</b> 
 +</div> 
 +</html> 
 +<hidden> 
 +<code> 
 +cryolo_evaluation.py -c config.json -w model.h5 -r runfiles/run_YearMonthDay-HourMinuteSecond.json -g 0 
 +</code> 
 +</hidden> 
 +<html> 
 +<div style="background-color: LightCyan ; padding: 10px; border: 1px solid Black;">  
 +<b> </b> 
 +</div> 
 +</html> 
 + 
 +The html file you specified as output looks like this:
  
 {{:pipeline:window:eval_example.png?900 |}} {{:pipeline:window:eval_example.png?900 |}}
Line 49: Line 65:
 Furthermore, crYOLO estimates the optimal picking threshold regarding the F1 Score and F2 Score. Both are basically average values of the recall and prediction, whereas the F2 score puts more weights on the recall, which is in cryo-EM often more important. Furthermore, crYOLO estimates the optimal picking threshold regarding the F1 Score and F2 Score. Both are basically average values of the recall and prediction, whereas the F2 score puts more weights on the recall, which is in cryo-EM often more important.
  
-<html> +
-<div style="background-color: LightCyan ; padding: 10px; border: 1px solid Black;">  +
-<b>Alternative: Run evaluation from the command line</b> +
-</div> +
-</html> +
-<hidden> +
-<code> +
-cryolo_evaluation.py -c config.json -w model.h5 -r runfiles/run_YearMonthDay-HourMinuteSecond.json -g 0 +
-</code> +
-</hidden> +
-<html> +
-<div style="background-color: LightCyan ; padding: 10px; border: 1px solid Black;">  +
-<b> </b> +
-</div> +
-</html>+
  
  
pipeline/window/cryolo/evaluate_results.txt · Last modified: 2020/03/16 15:27 by twagner