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pipeline:window:cryolo [2019/02/13 17:46]
twagner [Data preparation]
pipeline:window:cryolo [2019/02/26 07:57]
twagner [Configuration]
Line 181: Line 181:
 Open the file with your preferred editor. Open the file with your preferred editor.
  
-For the general **[[:cryolo_nets#network_3_phosaurusnet|Phosaurus network]]** enter the following inside:+For the general **[[:cryolo_nets#network_3_phosaurusnet|Phosaurus network]]** trained for **cryo images** enter the following inside:
 <code json config.json> <code json config.json>
     {     {
Line 191: Line 191:
         "num_patches":          1,         "num_patches":          1,
         "filter":               [0.1,"tmp_filtered"]         "filter":               [0.1,"tmp_filtered"]
 +      }
 +    }
 +</code>
 +
 +For the general model for **negative stain data** please use:
 +<code json config.json>
 +    {
 +    "model" : {
 +        "architecture":         "PhosaurusNet",
 +        "input_size":           1024,
 +        "anchors":              [205,205],
 +        "max_box_per_image":    700,
 +        "num_patches":          1
       }       }
     }     }
pipeline/window/cryolo.txt ยท Last modified: 2021/02/19 10:00 by twagner