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pipeline:window:cryolo

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pipeline:window:cryolo [2019/01/02 19:48]
twagner [Configuration]
pipeline:window:cryolo [2019/02/13 17:46]
twagner [Data preparation]
Line 217: Line 217:
  
 After this is done, you have to prepare training data for your model. After this is done, you have to prepare training data for your model.
- Right now, you have to use the e2helixboxer.py to generate the training data:+ Right now, you have to use the sxhelixboxer.py to generate the training data:
 <code> <code>
-e2helixboxer.py --gui my_images/*.mrc+sxhelixboxer.py --gui my_images/*.mrc
 </code> </code>
  
-After tracing your training data in e2helixboxer, export them using //File -> Save//. Make sure that you export particle coordinates as this the only format supported right now (see screenshot). In the following example, it is expected that you exported into a folder called "train_annotation".+After tracing your training data in sxhelixboxer, export them using //File -> Save//. Make sure that you export particle coordinates as this the only format supported right now (see screenshot). In the following example, it is expected that you exported into a folder called "train_annotation".
  
 ==== Configuration ==== ==== Configuration ====
pipeline/window/cryolo.txt ยท Last modified: 2021/02/19 10:00 by twagner