pipeline:viper:sp_proj_compare

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pipeline:viper:sp_proj_compare [2019/06/18 10:17]
shaikh [Files]
pipeline:viper:sp_proj_compare [2019/12/11 18:31]
shaikh
Line 11: Line 11:
   sp_proj_compare.py stack input_volume outdir --mode=viper --classangles=angles_file --classselect=img_selection_file --prjmethod=interpolation_method --delta=angular_increment --matchshift=shift_range --matchrad=outer_radius --matchstep=ring_step --symmetry=optional_symmetry --partangles=refinement_params --partselect=substack_select --refineshift=shift_range --outliers=max_angle_diff --refinerad=outer_radius --refinestep=ring_step --align=2d_alignment_method --display --verbose   sp_proj_compare.py stack input_volume outdir --mode=viper --classangles=angles_file --classselect=img_selection_file --prjmethod=interpolation_method --delta=angular_increment --matchshift=shift_range --matchrad=outer_radius --matchstep=ring_step --symmetry=optional_symmetry --partangles=refinement_params --partselect=substack_select --refineshift=shift_range --outliers=max_angle_diff --refinerad=outer_radius --refinestep=ring_step --align=2d_alignment_method --display --verbose
  
 +[{{ :​pipeline:​viper:​projcompare_1_3.png?​600 |Projections of ribosome (EMDB 10028). For each image in the montage, the left is a projection, and the right is the class average. }}]
  
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 ==== Bugs ==== ==== Bugs ====
-There are no known bugs so far.+2019/06/18 Strange behavior when the volume/​image dimension is odd. In the meantime, will pad by 1.
  
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  • pipeline/viper/sp_proj_compare.txt
  • Last modified: 2020/08/10 23:16
  • by shaikh