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pipeline:utilities:sxprocess

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pipeline:utilities:sxprocess [2018/11/20 10:17]
shaikh [Typical usage]
pipeline:utilities:sxprocess [2018/11/20 10:18]
shaikh [Typical usage]
Line 74: Line 74:
   sxprocess.py  --input="bdb:directory/stacks*"  --importctf=outdir/partres  --defocuserror=10.0  --astigmatismerror=5.0   sxprocess.py  --input="bdb:directory/stacks*"  --importctf=outdir/partres  --defocuserror=10.0  --astigmatismerror=5.0
  
-To concatenate output files,+To concatenate output files:
  
   cd directory   cd directory
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 18. Subtract from images in the first stack images in the second stack and write results to the third stack. 18. Subtract from images in the first stack images in the second stack and write results to the third stack.
-   If the name of the output stack is the same as the second stack, the results will be written to the second +\\ If the name of the output stack is the same as the second stack, the results will be written to the second stack (it will be overwritten).
-   stack (it will be overwritten).+
  
  sxprocess.py bdb:orgstack bdb:proj/data  bdb:proj/sdata bdb:proj/odata --subtract_stack  sxprocess.py bdb:orgstack bdb:proj/data  bdb:proj/sdata bdb:proj/odata --subtract_stack
pipeline/utilities/sxprocess.txt · Last modified: 2019/04/08 16:15 by shaikh