pipeline:sort3d:start []

pipeline:sort3d:start

This version is outdated by a newer approved version.

Diff

This version (2018/06/20 13:12) is a draft.
Approvals: 0/1

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SORT3D

Commands

Import Projection Parameters: Import projection parameters from a file to image header.
3D Variability Preprocess: Prepare your symmetric particles for variability calculations.
3D Variability Estimation: Calculate the 3D variability within your reconstruction.
3D Clustering from Iteration - SORT3D_DEPTH: Find 3D clusters within your data set by checking reproducible members using a MERIDIEN iteration.
SORT3D_DEPTH Stack Subset: Create virtual subset stack consisting from particles belong to a SORT3D_DEPTH cluster.
Local Refinement from Stack: Perform local refinement from the stack with user-provided orientation parameters.
PostRefiner: Combine unfiltered halfset volumes, then enhance the power spectrum.

Alternatives

3D Clustering from Stack - SORT3D_DEPTH: Find 3D clusters within your data set by checking reproducible members using a stack with user-provided orientation parameters.
Final 3D Reconstruction Only: Do only final 3D reconstruction using a fully finished 3D refinement iteration.

Utilities

Display Data: Displays images, volumes, or 1D plots.
Adaptive 3D Mask: Generates a soft-edged mask for a given volume.
Binary 3D Mask: Generates a hard mask for a given volume.
Angular Distribution: Creates a .bild file to display the particle orientation distribution in Chimera.
PostRefiner (Single Volumes): Enhancing the power spectrum of any single volumes (Single Volumes Mode).

pipeline/sort3d/start.1529493132.txt.gz · Last modified: 2019/04/02 12:30 (external edit)