janni

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janni [2019/08/27 10:01]
twagner [How to cite]
janni [2020/09/28 16:29] (current)
twagner [Changelog]
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 ==== Download ==== ==== Download ====
 === JANNI === === JANNI ===
-Version: 0.0.5+Version: 0.2
  
-Uploaded: ​29July 2019+Uploaded: ​28September 2020
  
 [[https://​pypi.org/​project/​janni/#​files|DOWNLOAD]] [[https://​pypi.org/​project/​janni/#​files|DOWNLOAD]]
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 Uploaded: 03. July 2019 Uploaded: 03. July 2019
  
-[[https://​github.com/​MPI-Dortmund/​sphire-janni/​tree/​master/​janni_general_models|DOWNLOAD]]+[[https://​github.com/​MPI-Dortmund/​sphire-janni/​raw/​master/​janni_general_models/​gmodel_janni_20190703.h5|DOWNLOAD]]
  
 ==== Known Issues ==== ==== Known Issues ====
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 2. After that, create a new virtual environment: ​ 2. After that, create a new virtual environment: ​
 <​code>​ <​code>​
-conda create -n janni -c anaconda python=3.6 cudnn=7.1.2 libtiff+conda create -n janni -c anaconda python=3.6 cudnn=7.1.2 libtiff ​wxPython=4.0.4
 </​code>​ </​code>​
  
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 ==== Getting started ==== ==== Getting started ====
-[[janni_tutorial|Here you can find a tutorial how to denoise your microgragh ​with JANNI]]+[[janni_tutorial|Here you can find a tutorial how to denoise your micrograghs ​with JANNI]]
  
 ==== How to cite ==== ==== How to cite ====
  
-You can cite JANNI using the ZENODO ​DOI:+You can cite JANNI using the Zenodo ​DOI:
  
 <​html>​ <​html>​
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 ==== Changelog ==== ==== Changelog ====
 +**JANNI 0.2**
 +  * Added support for binning. In case you recorded your movies in super resolution mode, but later want to apply JANNI to binned images, you need to bin your images during training. This now happens when '​bin.txt'​ file is available in the directory that contains the super resolution movies. The file '​bin.txt'​ simply contains the binning factor (like 2 for 2x binning).
 +  * JANNI now allows to choose between two loss functions: mean squared error (mse) or mean absolute error (mae). The latter is the new default.
 +
 +**JANNI 0.1.2**
 +  * Fix installation procedure.
 +
 +**JANNI 0.1.0**
 +  * Add GUI
 +  * API changes for crYOLO 1.5
 +
 **JANNI 0.0.5** **JANNI 0.0.5**
   * Downgrade tensorflow and numpy again as it leads to long initialization times for some users.   * Downgrade tensorflow and numpy again as it leads to long initialization times for some users.
  • janni.1566892871.txt.gz
  • Last modified: 2019/08/27 10:01
  • by twagner