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downloads:sphire_1_2 [2019/05/20 13:37]
mstabrin [Reinstall Pydusa (Required)] 		downloads:sphire_1_2 [2019/09/27 10:01]
twagner [Download]
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 ===== Tutorial ===== ===== Tutorial =====
  
-We are currently updating the tutorial to comply with the most recent version. In the meantime, links to the SPHIRE 1.0 tutorial and data sets are included below: +[[ftp://ftp.gwdg.de/pub/misc/sphire/sphire_1_2_tutorial/sphire_1_2.pdf|SPHIRE 1.2 tutorial]]
- +
-[[:downloads:sphire_1_0|SPHIRE 1.0]]+
  
 /* /*
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 The installer uses Anaconda, which should install independently of the choice of Linux distribution.  The Mac installer is experimental. SPHIRE does not support Windows. The installer uses Anaconda, which should install independently of the choice of Linux distribution.  The Mac installer is experimental. SPHIRE does not support Windows.
  
-  * [[ftp://ftp.gwdg.de/pub/misc/sphire/sphire_1_2/sphire_1_2_linux.sh|SPHIRE Linux binary installer]] +  * [[https://cryoem.bcm.edu/cryoem/downloads/view_eman2_version/29|SPHIRE Installation instructions (Needs update)]]
-  * [[ftp://ftp.gwdg.de/pub/misc/sphire/sphire_1_2/sphire_1_2_mac.sh|SPHIRE Mac binary installer (experimental)]]+
   * [[http://sphire.mpg.de/wiki/doku.php?id=downloads:cryolo_1|CrYOLO download]]   * [[http://sphire.mpg.de/wiki/doku.php?id=downloads:cryolo_1|CrYOLO download]]
   * [[https://github.com/MPI-Dortmund/transphire|TranSPHIRE GitHub page]]   * [[https://github.com/MPI-Dortmund/transphire|TranSPHIRE GitHub page]]
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 ==== Reinstall Pydusa (Required) ==== ==== Reinstall Pydusa (Required) ====
 +
 +=== Prerequisits ===
 +
 +0. Install pytz  
 +<code>python -m pip install pytz</code>  
  
 === Reinstall OpenMPI (Might be necessary) === === Reinstall OpenMPI (Might be necessary) ===
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 **Please check the information on our [[howto:preparesubmission|prepare submission installation]] site first, if there is already information about your queuing system.** **Please check the information on our [[howto:preparesubmission|prepare submission installation]] site first, if there is already information about your queuing system.**
    
-0. Install pytz   
-<code>python -m pip install pytz</code>   
 1. Change to the installation directory you specified during installation 1. Change to the installation directory you specified during installation
 <code> cd <path to EMAN2 directory> # e.g., $HOME/SPHIRE_1_2 (binary, source with own anaconda) or $ANACONDA_INSTALL/envs/SPHIRE_1_2 (source within existing anaconda) </code>  <code> cd <path to EMAN2 directory> # e.g., $HOME/SPHIRE_1_2 (binary, source with own anaconda) or $ANACONDA_INSTALL/envs/SPHIRE_1_2 (source within existing anaconda) </code> 
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   * On Mac Retina displays, problems with Qt: button size is larger, etc.   * On Mac Retina displays, problems with Qt: button size is larger, etc.
- 
downloads/sphire_1_2.txt · Last modified: 2019/09/27 10:02 by twagner

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