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--- downloads:cryolo_1 [2020/03/17 13:01]
twagner [crYOLO Boxmanager]
+++ downloads:cryolo_1 [2020/05/25 10:14]
twagner
@@ Line 1: / Line 1: @@
 {{ :downloads:cryolo_logo.jpg?600 |}}
+<note important>
+**DOCUMENTATION OUTDATED**
+The documentation has moved to https://cryolo.readthedocs.io/en/latest/
+</note>
 ====== License ======
@@ Line 12: / Line 20: @@
 You can find more technical details in our paper:
-Nature Communications Biology:
+Communications Biology:
 [[https://doi.org/10.1038/s42003-019-0437-z|SPHIRE-crYOLO is a fast and accurate fully automated particle picker for cryo-EM]]
@@ Line 32: / Line 40: @@
 ====crYOLO====
-Version: 1.5.6
+Version: 1.6.1
-Uploaded:  17. December 2019
+Uploaded:  30. March 2020
 [[https://pypi.org/project/cryolo/#files|DOWNLOAD]]
@@ Line 42: / Line 50: @@
 ====crYOLO boxmanager====
-Version: 1.2.9
+Version: 1.3.5
-Uploaded: 09. December 2019
+Uploaded: 22. March 2020
 [[https://pypi.org/project/cryoloBM/#files|DOWNLOAD]]
@@ Line 59: / Line 67: @@
 Uploaded: 16. March 2020
-[[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_phosnet_202020_N63.h5
+[[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_phosnet_202002_N63.h5
 |DOWNLOAD]]
@@ Line 65: / Line 73: @@
 Number of datasets: 43 real, 10 simulated, 10 particle free datasets on various grids with contamination
-Uploaded: 15. Oktober 2019
+Uploaded: 17. March 2020
-[[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_phosnet_201912_nn_N63.h5
+[[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_phosnet_202003_nn_N63.h5
 |DOWNLOAD]]
@@ Line 89: / Line 97: @@
 ====== Installation ======
+<note important>
+**DOCUMENTATION OUTDATED**
+The documentation has moved to https://cryolo.readthedocs.io/en/latest/
+</note>
 **System requirements:**
@@ Line 163: / Line 179: @@
 {{page>pipeline:window:cryolo:changelog}}
 ====crYOLO Boxmanager====
+**crYOLO Boxmanager 1.3.5**
+  * Fixed a bug when placing, moving or deleting a box
+  * Fixed bug of nun closing progress dialog when writing boxfiles
+**crYOLO Boxmanager 1.3.1**
+  * Speed up boxfile import is now 2x faster compared to 1.3.0.
+  * Big speed-up for live-preview during filtering. Should now even work with very big datasets.
 **crYOLO Boxmanager 1.3.0**
-  * Add option to plot size- and confidence distribution for cbox files.
+  * Added option to plot size- and confidence distribution for cbox files.
-  * Add slider to filter particles according their estimated size.
+  * Added slider to filter particles according their estimated size.
-  * Add addition field for the number of boxes with live update.
+  * Added addition field for the number of boxes with live update.
-  * Add wildcard commandline option
+  * Added wildcard commandline option.
-  * Show progress-bar for reading and writing box-files
+  * Show progress-bar when reading and writing box-files.
+  * Various speed-ups.
 <hidden **Old crYOLO Boxmanager change logs**>
@@ Line 221: / Line 247: @@
 </hidden>
 ==== General PhosaurusNet model ====
-**Version 201912:**:
+**Version 202002:**
+  * Adjusted the training data that the box sizes better reflect the particle diameter.
+**Version 201912:**
   * Added two more datasets.
-**Version 20190516:**:
+**Version 20190516:**
   * Added four more inhouse datasets
   * Added SNRNP (Thanks to Clement Charenton)

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