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cryolo_archive [2018/12/20 15:23]
twagner [General model YOLO patched mode] 		cryolo_archive [2019/02/18 10:21]
twagner [General PhosaursNet model]
Line 2: Line 2:
  
 ==== crYOLO ==== ==== crYOLO ====
 +
 +=== Version: 1.2.2 ===
 +
 +Uploaded:  21. December 2018 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_2_2/cryolo-1.2.2.tar.gz|DOWNLOAD]]
 +
 +=== Version: 1.2.1 ===
 +
 +Uploaded:  05. December 2018 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_2_1/cryolo-1.2.1.tar.gz|DOWNLOAD]]
  
 === Version: 1.2.0 === === Version: 1.2.0 ===
  
 Uploaded:  27. November 2018 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_2_0/cryolo-1.2.0.tar.gz|DOWNLOAD]] Uploaded:  27. November 2018 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_2_0/cryolo-1.2.0.tar.gz|DOWNLOAD]]
- 
  
 === Version: 1.1.4 === === Version: 1.1.4 ===
Line 51: Line 58:
  
 ==== crYOLO boxmanager ==== ==== crYOLO boxmanager ====
 +
 +=== Version: 1.1.0 ===
 +
 +Uploaded: 27. November 2018 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_BM_V1_1_0/cryoloBM-1.1.0.tar.gz|DOWNLOAD]]
 +
  
 === Version: 1.0.4 === === Version: 1.0.4 ===
Line 76: Line 88:
 ---- ----
  
 +==== General PhosaursNet model ===
 +
 +[[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_phosnet_20181221_loss0037.h5
 +|DOWNLOAD]] (Uploaded: 21. December 2018)  Number of datasets: 27 (real), 10 simulated, 10 particle free datasets on various grids with contaminations
 +
 +<code json config.json>
 +    {
 +    "model" : {
 +        "architecture":         "PhosaurusNet",
 +        "input_size":           1024,
 +        "anchors":              [205,205],
 +        "max_box_per_image":    700,
 +        "num_patches":          1,
 +        "filter":               [0.1,"tmp_filtered"]
 +      }
 +    }
 +</code>
  
 ==== General model YOLO patched mode ==== ==== General model YOLO patched mode ====
Line 85: Line 114:
 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_yolo_20181127_1100.h5|DOWNLOAD]] (Uploaded: 27. November 2018) Number of datasets: 27 (real), 10 simulated, 10 particle free datasets on various grids [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_yolo_20181127_1100.h5|DOWNLOAD]] (Uploaded: 27. November 2018) Number of datasets: 27 (real), 10 simulated, 10 particle free datasets on various grids
  
-[[pipeline:window:cryolo#configuration1 |Valid configuration file]] +<code json config.json> 
- +{ 
-Info: Trained on cryo images, therefore negative stain will not work.+    "model" : { 
 +        "architecture":         "YOLO", 
 +        "input_size":           1024, 
 +        "anchors":              [205,205], 
 +        "overlap_patches":      200, 
 +        "max_box_per_image":    700, 
 +        "num_patches":          2, 
 +        "filter":               [0.1,"tmp_filtered"] 
 +    } 
 +} 
 +</code>
  
 === Version 20180823 === === Version 20180823 ===
cryolo_archive.txt · Last modified: 2019/10/15 16:41 by twagner

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