This shows you the differences between two versions of the page.
Both sides previous revision Previous revision Next revision | Previous revision Next revision Both sides next revision | ||
auto2d_tutorial [2019/05/28 22:15] twagner [Classify] |
auto2d_tutorial [2019/08/15 15:35] twagner [Classify] |
||
---|---|---|---|
Line 23: | Line 23: | ||
" | " | ||
" | " | ||
- | " | + | " |
+ | " | ||
+ | " | ||
} | } | ||
} | } | ||
</ | </ | ||
- | Copy this into a new file called '' | + | The fields have the following meaning: |
+ | * **input_size**: | ||
+ | * **batch_size**: | ||
+ | * **good_classes**: | ||
+ | * **bad_classes**: | ||
+ | * **pretrained_weights**: | ||
+ | * **saved_weights_name**: | ||
+ | * **learning_rate**: | ||
+ | * **nb_epoch**: | ||
+ | * **nb_early_stop**: | ||
+ | * **train_valid_thresh**: | ||
+ | * **max_valid_img_per_file**: | ||
+ | |||
+ | Copy this into a new file called '' | ||
To run the classification I suppose you want to separate good and bad classes in classes_after_isac.hdf (or any other .mrcs / .hdf file with classes) and you want to save your new .hdf (.mrcs) files into the folder '' | To run the classification I suppose you want to separate good and bad classes in classes_after_isac.hdf (or any other .mrcs / .hdf file with classes) and you want to save your new .hdf (.mrcs) files into the folder '' | ||
Line 35: | Line 50: | ||
< | < | ||
- | sp_cinderella_predict.py -i path/ | + | sp_cinderella_predict.py -i path/ |
</ | </ | ||
Line 60: | Line 75: | ||
" | " | ||
" | " | ||
- | " | + | " |
} | } | ||
} | } |