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pipeline:window:start [2018/06/20 13:12] 127.0.0.1 external edit |
pipeline:window:start [2019/04/02 11:40] lusnig |
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=== Commands === | === Commands === | ||
- | ; [[e2boxer_old|Particle Coordinates]] : Generate | + | ; [[sp_cryolo_predict|crYOLO - predict]] : Prediction with crYOLO, a deep learning high accuracy |
; [[sxwindow|Particle Extraction]] : Extract particle images from micrographs using particle coordinates files. | ; [[sxwindow|Particle Extraction]] : Extract particle images from micrographs using particle coordinates files. | ||
; [[pipeline: | ; [[pipeline: | ||
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=== Alternatives === | === Alternatives === | ||
+ | ; [[e2boxer_old|Particle Coordinates]] : Generate particle coordinates files using e2boxer_old particle picker. | ||
; [[e2boxer|Particle Coordinates (NEW)]] : Generate particle coordinates files using new version of e2boxer particle picker. | ; [[e2boxer|Particle Coordinates (NEW)]] : Generate particle coordinates files using new version of e2boxer particle picker. | ||
+ | ; [[pipeline: | ||
+ | ; [[sxrewindow|Particle reextraction]] : Rewindows particles based on rebox files. | ||
+ | ; [[sp_cryolo_train|crYOLO - training]] : Training of crYOLO, a deep learning high accuracy particle picking procedure | ||
+ | | ||
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=== Utilities === | === Utilities === | ||
; [[pipeline: | ; [[pipeline: | ||
; [[pipeline: | ; [[pipeline: | ||
+ | ; [[sp_cryolo_boxmanager|crYOLO - boxmanager]] : Displays boxfiles on images. Allows creation of new training data for crYOLO | ||
+ | ; [[pipeline: | ||