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--- pipeline:window:cryolo [2019/08/30 13:51]
twagner [Configuration]
+++ pipeline:window:cryolo [2019/09/13 09:49]
twagner [Installation]
@@ Line 36: / Line 36: @@
 You can find the download and installation instructions here: [[howto:download_latest_cryolo|Download and Installation]]
+===== General description =====
 ===== Picking particles - Using a model trained for your data =====
@@ Line 68: / Line 69: @@
   * CONTROL + LEFT MOUSE BUTTON: Remove a box
-You can change the box size in the main window, by changing the number in the text field labeled //Box size://. Press //Set// to apply it to all picked particles. For picking, you should the use minimum sized square which encloses your particle.
+You can change the box size in the main window, by changing the number in the text field labeled //Box size://. Press //Set// to apply it to all picked particles. __For picking, you should the use minimum sized square which encloses your particle.__
 If you finished picking from your micrographs, you can export your box files with //Files -> Write box files//.
@@ Line 76: / Line 77: @@
 ==== Configuration ====
-You now have to create a config file your picking project. To do this type:
+You now have to create a configuration file your picking project. It contains all important constants and paths and helps you to reproduce your results later on.
+You can either use the commandline to create the configuration file or the GUI.
+**Using the command line:**
+To create an empty file do:
 <code>
 touch config.json
@@ Line 145: / Line 152: @@
 Please note the wiki entry about the [[:cryolo_config|crYOLO configuration file]] if you want to know more details.
+**Using the GUI:**
 ==== Training ====

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