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--- pipeline:window:cryolo [2019/02/26 07:55]
twagner [Configuration]
+++ pipeline:window:cryolo [2019/02/26 08:13]
twagner [Configuration]
@@ Line 181: / Line 181: @@
 Open the file with your preferred editor.
+There are two general **[[:cryolo_nets#network_3_phosaurusnet|Phosaurus networks]]** available. One for cryo em images and one for negative stain data.
+=== CryoEM images ===
 For the general **[[:cryolo_nets#network_3_phosaurusnet|Phosaurus network]]** trained for **cryo images** enter the following inside:
 <code json config.json>
@@ Line 194: / Line 196: @@
     }
 </code>
+Please set the value in the //"anchors"// field to your desired box size. It should be size of the minimum particle enclosing square in pixel.
+=== Negative stain images ===
 For the general model for **negative stain data** please use:
 <code json config.json>
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         "max_box_per_image":    700,
         "num_patches":          1
       }
     }