Differences

This shows you the differences between two versions of the page.

--- pipeline:window:cryolo:visualize [2019/09/17 08:39]
twagner
+++ pipeline:window:cryolo:visualize [2019/09/17 08:41]
twagner
@@ Line 3: / Line 3: @@
 cryolo_boxmanager.py
 </code>
-Now press //File -> Open image// folder and the select the ''full_data'' directory. The first image should pop up. Then you import the box files with //File -> Import box files// and select in the ''boxfiles'' folder the ''EMAN'' directory.
+Now press //File -> Open image// folder and the select the ''full_data'' directory. The first image should pop up. Then you import the box files with //File -> Import box files// and select in the ''boxfiles'' folder the ''EMAN'' directory or ''EMAN_HELIX_SEGMENTED'' in case of filaments .
 <note warning>
 **The following does not yet work for filaments**.
 </note>
-Since version 1.3.0 crYOLO writes cbox files in a separate ''CBOX'' folder. You can import them into the box manager, change the threshold easily using the live preview and write the new box selection into new box files.
+Since version 1.3.0 crYOLO writes cbox files in a separate ''CBOX'' folder. You can import them into the box manager, change the confidence threshold easily using the live preview and write the new box selection into new box files.
 [{{ :pipeline:window:ezgif-1-3b966b0324d1.gif?400 |This example shows how to filter particle boxes using the cryolo boxmanager. It is an animated gif. Click on it to see it playing.}}]