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pipeline:window:cryolo:v1_5 [2019/09/18 13:09] twagner [New GUI] |
pipeline:window:cryolo:v1_5 [2019/09/20 10:38] twagner [New GUI] |
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The crYOLO GUI is essentially a visualization of the command line interface. But don't worry, the command line interface is still available. | The crYOLO GUI is essentially a visualization of the command line interface. But don't worry, the command line interface is still available. | ||
- | On left side of the GUI, you find all possible “Actions”: | + | ==== Faster ==== |
- | * config: With this action you create | + | An optimized filtering pipeline make the low-pass filter 2.5 times faster. Furthermore, |
- | * train: This action lets you train crYOLO from scratch or refine an existing model. | + | This in consequence makes |
- | * predict: If you have a (pre)trained model you can pick particles in your data set using this command. | + | * the training 75% |
- | * evaluation: This action helps you to quantify | + | * picking 60% faster |
+ | * on-the-fly filtering is now 2.5 times faster compared to 1.4.0. | ||
- | Each action has several parameters which are organized in tabs. Once you have chosen your settings you can press [Start], | + | ==== Monitor mode ==== |
- | {{ : | + | New monitor mode for prediction: When this option is activated, crYOLO will monitor your input folder. This especially useful for automation purposes. You can stop the monitor mode by writing an empty file with the name “stop.cryolo” in the input directory. |
+ | Just add %%--%%monitor in the command line or check the monitor box in GUI. | ||
+ | |||
+ | ==== Minor ==== | ||
+ | * Add rotation as additional data augmentation | ||
+ | * Number of layers for fine tuning are now changeable (-lft) | ||
+ | * cryolo_evaluation.py will now output a html file with the results. | ||
+ | * Set patch argument as deprecated | ||
+ | * crYOLO will not allocate the complete GPU memory anymore. | ||
+ | * Remove warmup as config file option. Please specify it with -w. |