User Tools

Site Tools


pipeline:window:cryolo:picking_general

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision
Previous revision
Next revision Both sides next revision
pipeline:window:cryolo:picking_general [2019/09/17 14:15]
twagner [Picking particles - Without training using a general model]
pipeline:window:cryolo:picking_general [2019/09/18 08:38]
twagner [2. Configuration]
Line 1: Line 1:
 ===== Picking particles - Without training using a general model ===== ===== Picking particles - Without training using a general model =====
-Here you can find how to apply the general models we trained for you. If you would like to train your own general model, please see our extra wiki page: [[:cryolo_train_general_model|How to train your own general model]]+Here you can find how to apply the general models we trained for you. If you would like to train your own general model, please see our extra wiki page: [[:cryolo_train_general_model|How to train your own general model]].
  
 Our general models can be found and downloaded here: [[howto:download_latest_cryolo|Download and Installation]].  Our general models can be found and downloaded here: [[howto:download_latest_cryolo|Download and Installation]]. 
Line 9: Line 9:
 source activate cryolo source activate cryolo
 </code> </code>
-==== Start crYOLO ====+==== 1. Start crYOLO ====
 {{page>pipeline:window:cryolo:start_cryolo}} {{page>pipeline:window:cryolo:start_cryolo}}
  
-==== Configuration====+==== 2. Configuration====
 In the GUI choose the //config// action. Fill in your target box size and leave the //train_image_folder// and //train_annot_folder// fields empty. In the GUI choose the //config// action. Fill in your target box size and leave the //train_image_folder// and //train_annot_folder// fields empty.
  
Line 25: Line 25:
 <html> <html>
 <div style="background-color: #cfc ; padding: 10px; border: 1px solid green;">  <div style="background-color: #cfc ; padding: 10px; border: 1px solid green;"> 
-<b>Press the Start button to write the configuration file to disk.  </b>+<b>&#9658; Press the [Startbutton to write the configuration file to disk.  </b>
 </div> </div>
 </html> </html>
Line 31: Line 31:
  
  
-<hidden **Create the configuration file using the command line**>+<hidden **Alternative:** Create the configuration file using the command line>
 In the following I assume that you target box size is 220. Please adapt if necessary. In the following I assume that you target box size is 220. Please adapt if necessary.
  
Line 50: Line 50:
 </hidden> </hidden>
  
-==== Picking ====+==== 3. Picking ====
 {{page>pipeline:window:cryolo:picking}} {{page>pipeline:window:cryolo:picking}}
  
-==== Visualize the results ====+==== 4. Visualize the results ====
 {{page>pipeline:window:cryolo:visualize}} {{page>pipeline:window:cryolo:visualize}}
  
pipeline/window/cryolo/picking_general.txt ยท Last modified: 2020/06/05 09:03 by twagner