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pipeline:movie:sxgui_unblur

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pipeline:movie:sxgui_unblur [2018/02/16 10:11]
127.0.0.1 external edit 		pipeline:movie:sxgui_unblur [2018/06/20 13:12]
127.0.0.1 external edit
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 ~~NOTOC~~ ~~NOTOC~~
  
-===== sxgui_unblur =====  +===== sxgui_unblur ===== 
-Drift Assessment: Assess micrographs based on drift estimation produced by Unblur.+Drift Assessment: Assess micrographs based on drift estimation produced by [[http://grigoriefflab.janelia.org/unblur|Unblur]].
  
 \\ \\
 ===== Usage ===== ===== Usage =====
 +
 Usage in command line Usage in command line
  
-  sxgui_unblur.py inputfile input_shift_list_file+  sxgui_unblur.py  inputfile  input_shift_list_file
  
 \\ \\
 ===== Typical usage ===== ===== Typical usage =====
-sxgui_unblur GUI tool can be run as a stand-alone program or from the SPHIRE GUI.+ 
 +sxgui_unblur does not support MPI.  
 + 
 +This GUI tool can be run as a stand-alone program or from the SPHIRE GUI.
  
   sxgui_unblur.py   sxgui_unblur.py
 +
   sxgui_unblur.py 'example-*_shift.txt'   sxgui_unblur.py 'example-*_shift.txt'
 +
   sxgui_unblur.py 'example-list'   sxgui_unblur.py 'example-list'
 +
   sxgui_unblur.py 'example-*_shift.txt' 'example-list'   sxgui_unblur.py 'example-*_shift.txt' 'example-list'
  
 \\ \\
 ===== Input ===== ===== Input =====
-  ; inputfile : Shift files: A wild card * can be used to process multiple shift files. (default none)+=== Main Parameters === 
 +  ; inputfile : Shift files: A wild card (*) can be used to process multiple shift files. (default none)
   ; input_shift_list_file : Input shift list file: Extension of input shift list file must be '.txt'. If this is not provided, all files matched with the micrograph name pattern will be processed. (default none)   ; input_shift_list_file : Input shift list file: Extension of input shift list file must be '.txt'. If this is not provided, all files matched with the micrograph name pattern will be processed. (default none)
 +
 +\\
 +=== Advanced Parameters ===
  
 \\ \\
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 \\ \\
 ===== Description ===== ===== Description =====
-As of 16/12/2016, we are preparing a detailed descriptions of the usage and features of this tool.+ 
 +\\ 
 +==== Method ==== 
 + 
 +\\ 
 +==== Reference ==== 
 + 
 +\\ 
 +==== Developer Notes ==== 
 +=== 2016/12/16 Markus Stabrin === 
 +We are preparing a detailed descriptions of the usage and features of this tool.
  
 \\ \\
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 \\ \\
-=== See also === +==== See also ==== 
-[[:pipeline:movie:sxunblur | sxunblur]]+[[pipeline:movie:sxunblur|sxunblur]] and [[http://grigoriefflab.janelia.org/unblur|Unblur & Summovie]].
  
 \\ \\
 ==== Maturity ==== ==== Maturity ====
-alpha:: in development+Alpha:: Under development. Please let us know if there are any bugs.
  
 \\ \\
 +==== Bugs ====
 +There are no known bugs so far.
 +
 +\\
 +
pipeline/movie/sxgui_unblur.txt · Last modified: 2019/04/02 10:55 by lusnig

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