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pipeline:meridien:start [2018/08/22 12:31] fmerino |
pipeline:meridien:start [2021/02/19 14:27] shaikh |
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=== Commands === | === Commands === | ||
- | ; [[sxmeridien|3D Refinement]] : Perform automatic 3D structure refinement as standard fresh run (default run). | ||
- | ; [[sxgui_meridien|3D Refinement Assessment]] : GUI tool to assess MERIDIEN 3D Refinement outputs. | ||
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=== Alternatives === | === Alternatives === | ||
- | ; [[sxmeridien|Local Refinement from Iteration]] : Perform local refinement from the last fully finished 3D refinement iteration. | ||
- | ; [[sxmeridien|Local Refinement from Stack]] : Perform local refinement from the stack with user-provided orientation parameters. | ||
- | ; [[sxmeridien|3D Refinement Continuation]] : Perform continuation run of 3D refinement from the last fully finished 3D refinement iteration. | ||
- | ; [[sxmeridien|Final 3D Reconstruction Only]] : Do only final 3D reconstruction using a fully finished 3D refinement iteration. | ||
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=== Utilities === | === Utilities === | ||
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- | ; [[pipeline:utilities:sxprocess|Adaptive 3D Mask]] : Generates a soft-edged mask for a given volume. | + | ; [[:pipeline: |
- | ; [[pipeline: | + | ; [[:pipeline:viper:sp_mask|Masking]] : Mask creation tool for 2D or 3D masks. |
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