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pipeline:meridien:sp_polishing [2021/03/16 10:09] aali |
pipeline:meridien:sp_polishing [2021/03/16 10:30] aali |
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: After running the polishing routine, the wrapper automatically converts the shiny.star in | : After running the polishing routine, the wrapper automatically converts the shiny.star in | ||
the Output folder to a BDB stack and saves it in the folder name of Polish Stack. | the Output folder to a BDB stack and saves it in the folder name of Polish Stack. | ||
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===== Output ===== | ===== Output ===== | ||
- | + | ; shiny.star : Output star file for polishing particles. | |
- | ; ; bdb: | + | ; bdb: |
+ | ; BDB2STAR : Using sphire2relion tool , the bdb stack is converted to star file so that it can be used in relion. The star file is saved in BDB2STAR folder. | ||
+ | ; PostProcess : Since the input to the tool is Post refiner directory, the tool can automatically create the necessary file in PostProcess folder which is necessary to provide for polishing. | ||
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