This shows you the differences between two versions of the page.
Both sides previous revision Previous revision Next revision | Previous revision Next revision Both sides next revision | ||
pipeline:cter:sxgui_cter [2018/06/20 13:12] 127.0.0.1 external edit |
pipeline:cter:sxgui_cter [2019/06/07 11:47] shaikh |
||
---|---|---|---|
Line 1: | Line 1: | ||
~~NOTOC~~ | ~~NOTOC~~ | ||
- | ===== sxgui_cter | + | ===== sp_gui_cter |
- | CTF Assessment: GUI tool to assess and sort micrographs | + | CTF Assessment: GUI tool to assess and sort micrographs |
\\ | \\ | ||
Line 9: | Line 9: | ||
Usage in command line | Usage in command line | ||
- | | + | |
\\ | \\ | ||
===== Typical usage ===== | ===== Typical usage ===== | ||
- | sxgui_cter | + | sp_gui_cter |
+ | |||
+ | sp_gui_cter.py | ||
+ | |||
+ | Upon startup, the following windows will appear: | ||
+ | |||
+ | ; Control panel : Main window controlling display of the other windows, and displaying data from partres.txt | ||
+ | ; Rotational average plot, zoomed : 1D profiles of the power spectra, experimental and calculated | ||
+ | ; Histogram : Plot of number of micrographs as a function of a selected parameter (see below) | ||
+ | ; Sort plot : Plot of a selected parameter (see below) for each micrograph | ||
- | sxgui_cter.py | ||
\\ | \\ | ||
===== Input ===== | ===== Input ===== | ||
=== Main Parameters === | === Main Parameters === | ||
- | ; cter_ctf_file : File containing CTF parameters: This file is produced by sxcter | + | ; cter_ctf_file : File containing CTF parameters: This file is produced by sp_cter |
\\ | \\ | ||
Line 41: | Line 49: | ||
==== Developer Notes ==== | ==== Developer Notes ==== | ||
=== 2017/12/07 Toshio Moriya === | === 2017/12/07 Toshio Moriya === | ||
- | The format of '' | + | The format of '' |
\\ | \\ | ||
Line 53: | Line 61: | ||
\\ | \\ | ||
==== Files ==== | ==== Files ==== | ||
- | sparx/bin/sxgui_cter.py | + | sparx/bin/sp_gui_cter.py |
\\ | \\ | ||
==== See also ==== | ==== See also ==== | ||
- | [[pipeline: | + | [[pipeline: |
\\ | \\ | ||
Line 68: | Line 76: | ||
\\ | \\ | ||
- |