This shows you the differences between two versions of the page.
Both sides previous revision Previous revision Next revision | Previous revision Next revision Both sides next revision | ||
janni_tutorial [2019/09/16 11:17] twagner [Denoise] |
janni_tutorial [2019/09/16 13:22] shaikh [Start JANNI] |
||
---|---|---|---|
Line 4: | Line 4: | ||
[[https:// | [[https:// | ||
- | JANNI can be used a command line tool but also provides an simple interface to be integrated into other programs. | + | Besides |
==== Download and Installation ==== | ==== Download and Installation ==== | ||
Line 15: | Line 15: | ||
</ | </ | ||
- | You can use JANNI either by command line or with the GUI. Typically, most users prefer to use the GUI (but we will also provide the command line commands in this tutorial). You can start the GUI with | + | You can use JANNI either by command line or with the GUI. Typically, most users prefer to use the GUI (but we will also provide the command line commands in this tutorial). You can start the GUI with: |
< | < | ||
janni_denoise.py | janni_denoise.py | ||
</ | </ | ||
- | The GUI is basically | + | The GUI is essentially |
{{ :: | {{ :: | ||
Line 29: | Line 29: | ||
* **denoise**: | * **denoise**: | ||
- | Each action has several parameters which are organized in tabs. Once you chosen your settings you can press “Start”, the command will be applied and JANNI shows you the output: | + | Each action has several parameters which are organized in tabs. Once you chosen your settings you can press "Start," and the command will be applied and JANNI shows you the output: |
{{ : | {{ : | ||
- | It will tell you when something | + | It will tell you if something |
==== Training a model for your data ==== | ==== Training a model for your data ==== | ||
In case you want to use the general model ([[janni# | In case you want to use the general model ([[janni# |