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janni_tutorial [2019/09/16 09:11]
twagner [Start JANNI]
janni_tutorial [2019/09/16 09:30]
twagner [Training a model for your data]
Line 19: Line 19:
 janni_denoise.py janni_denoise.py
 </code> </code>
 +
 +The GUI is basically a visualization of the command line interface:
  
 {{ ::start_01.png?700 |}} {{ ::start_01.png?700 |}}
 +
 +On the left side, you can see all available actions:
 +  * **config**: To create a config file, which is needed to train JANNI.
 +  * **train**: This action let you train a model for your data.
 +  * **denoise**: Run this action to apply a model on new images.
 +
 +Each action has several parameters which are organized in tabs. Once you chosen your settings you can press “Start”, the command will be applied and JANNI shows you the output: 
 +
 +{{ :janni_start_02.png?700 |}}
 +
 +It will tell you when something went wrong. Pressing “edit” brings you back to your settings, where you can either edit the settings (in case something went wrong) or go to the next action. 
 ==== Training a model for your data ==== ==== Training a model for your data ====
 In case you want to use the general model ([[janni#Download|Download here]]) you can skip this part and directly [[janni_tutorial#denoise|denoise]] your images.  In case you want to use the general model ([[janni#Download|Download here]]) you can skip this part and directly [[janni_tutorial#denoise|denoise]] your images. 
  
-In case you would like to train a model for your data, the first thing you have to do is to create a configuration file for JANNI. In the following I assume you named it //config.json//. It should look like this:+In case you would like to train a model for your data, the first thing you have to do is to create a configuration file for JANNI. 
 + 
 +In the GUI choose the action "config" and fill out the required arguments: 
 +{{ ::jann_config_02.png?700 |}} 
 + 
 + In the following I assume you named it //config.json//. It should look like this:
 <code json config.json> <code json config.json>
 { {
janni_tutorial.txt · Last modified: 2020/09/24 14:46 by twagner