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janni_tutorial [2019/09/12 10:29] twagner [Training a model for your data] |
janni_tutorial [2019/09/16 09:18] twagner [Start JANNI] |
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You can find the download and installation instructions here: [[janni|Download and Installation]] | You can find the download and installation instructions here: [[janni|Download and Installation]] | ||
+ | ==== Start JANNI ==== | ||
+ | If you followed the installation instructions, | ||
+ | < | ||
+ | source activate janni | ||
+ | </ | ||
+ | |||
+ | You can use JANNI either by command line or with the GUI. Typically, most users prefer to use the GUI (but we will also provide the command line commands in this tutorial). You can start the GUI with | ||
+ | < | ||
+ | janni_denoise.py | ||
+ | </ | ||
+ | |||
+ | The GUI is basically a visualization of the command line interface: | ||
+ | |||
+ | {{ :: | ||
+ | |||
+ | On the left side, you can see all available actions: | ||
+ | * **config**: To create a config file, which is needed to train JANNI. | ||
+ | * **train**: This action let you train a model for your data. | ||
+ | * **denoise**: | ||
+ | |||
+ | Each action has several parameters which are organized in tabs. Once you chosen your settings you can press “Start”, | ||
+ | |||
+ | It will tell you when something went wrong. Pressing “edit” brings you back to your settings, where you can either edit the settings (in case something went wrong) or go to the next action. | ||
==== Training a model for your data ==== | ==== Training a model for your data ==== | ||
In case you want to use the general model ([[janni# | In case you want to use the general model ([[janni# |