User Tools

Site Tools

janni_tutorial

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision 		Previous revision
Next revision Both sides next revision
janni_tutorial [2019/07/03 15:08]
twagner [Denoise] 		janni_tutorial [2019/07/03 15:09]
twagner [Denoise]
Line 53: Line 53:
  
 To denoise a set if images you have to tell JANNI three **mandatory** arguments: To denoise a set if images you have to tell JANNI three **mandatory** arguments:
-  +  - //input_path//: This path points to the directory with your images. 
-1. //input_path//: This path points to the directory with your images. +  - //ouput_path//: This path points to a directory where the results will be written 
-2. //ouput_path//: This path points to a directory where the results will be written +  - //model_path//: This path points to the model you want to use (the .h5 file).
-3. //model_path//: This path points to the model you want to use (the .h5 file).+
  
 As model you can either use the model you trained for your data or the general model ([[janni#Download|Download here]]). As model you can either use the model you trained for your data or the general model ([[janni#Download|Download here]]).
Line 66: Line 65:
  
 Here is now how you do the actual denoising: Here is now how you do the actual denoising:
-It is assumed that you run the command in a directory with the with your model file ''mymodel.h5'' (might have a different name in case of the general model). Furthermore, it is assumed that your would like denoise averages in the folder ///my/averages/// and want to write results in the folder ///my/outputdir/denoised///+It is assumed that you run the command in a directory with the with your model file ''mymodel.h5'' (might have a different name in case of the [[janni#Download|general model]]). Furthermore, it is assumed that your would like denoise averages in the folder ///my/averages/// and want to write results in the folder ///my/outputdir/denoised///
  
 The following command will run the denoising on GPU 0: The following command will run the denoising on GPU 0:
janni_tutorial.txt · Last modified: 2020/09/24 14:46 by twagner

Page Tools

Except where otherwise noted, content on this wiki is licensed under the following license: GNU Free Documentation License 1.3
GNU Free Documentation License 1.3 Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki