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janni [2019/07/09 14:46] twagner [Installation] |
janni [2019/07/10 13:13] twagner [Just Another Noise 2 Noise Implementation (JANNI)] |
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JANNI can be used a command line tool but also provides an simple interface to integrate into other programs (see [[janni_tutorial# | JANNI can be used a command line tool but also provides an simple interface to integrate into other programs (see [[janni_tutorial# | ||
+ | < | ||
* **License**: | * **License**: | ||
* **GitHub repository**: | * **GitHub repository**: | ||
+ | </ | ||
This is an example where we applied JANNI: | This is an example where we applied JANNI: | ||
{{ :: | {{ :: | ||
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+ | <note warning> | ||
+ | The denoised micrographs are likely bad to use for further processing besides picking. | ||
+ | </ | ||
==== Download ==== | ==== Download ==== | ||
=== JANNI === | === JANNI === | ||
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</ | </ | ||
- | Now can install JANNI either for GPUs or for CPUs: | + | Now can install JANNI either for GPUs **or** for CPUs: |
- | **For GPU:** | + | 4a. **For GPU:** Install JANNI form PyPi for a GPU machine: |
- | 4. Install JANNI form PyPi for a GPU machine: | + | |
< | < | ||
pip install janni[gpu] | pip install janni[gpu] | ||
</ | </ | ||
- | **For CPU:** | + | 4b. **For CPU:** Install JANNI form PyPi for a CPU machine: |
- | 4. Install JANNI form PyPi for a CPU machine: | + | |
< | < | ||
pip install janni[cpu] | pip install janni[cpu] |