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downloads:sphire_1_2 [2019/04/26 16:20]
mstabrin
downloads:sphire_1_2 [2019/09/27 10:01]
twagner [Download]
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 ===== Tutorial ===== ===== Tutorial =====
  
-We are currently updating the tutorial to comply with the most recent version. In the meantime, links to the SPHIRE 1.0 tutorial and data sets are included below: +[[ftp://ftp.gwdg.de/pub/misc/sphire/sphire_1_2_tutorial/sphire_1_2.pdf|SPHIRE 1.2 tutorial]]
- +
-[[:downloads:sphire_1_0|SPHIRE 1.0]]+
  
 /* /*
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 The installer uses Anaconda, which should install independently of the choice of Linux distribution.  The Mac installer is experimental. SPHIRE does not support Windows. The installer uses Anaconda, which should install independently of the choice of Linux distribution.  The Mac installer is experimental. SPHIRE does not support Windows.
  
-  * [[ftp://ftp.gwdg.de/pub/misc/sphire/sphire_1_2/sphire_1_2_linux.sh|SPHIRE Linux binary installer]] +  * [[https://cryoem.bcm.edu/cryoem/downloads/view_eman2_version/29|SPHIRE Installation instructions (Needs update)]]
-  * [[ftp://ftp.gwdg.de/pub/misc/sphire/sphire_1_2/sphire_1_2_mac.sh|SPHIRE Mac binary installer (experimental)]]+
   * [[http://sphire.mpg.de/wiki/doku.php?id=downloads:cryolo_1|CrYOLO download]]   * [[http://sphire.mpg.de/wiki/doku.php?id=downloads:cryolo_1|CrYOLO download]]
   * [[https://github.com/MPI-Dortmund/transphire|TranSPHIRE GitHub page]]   * [[https://github.com/MPI-Dortmund/transphire|TranSPHIRE GitHub page]]
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 ==== Reinstall Pydusa (Required) ==== ==== Reinstall Pydusa (Required) ====
  
-=== Preparations ===+=== Prerequisits ===
  
-The current procedure is broken, therefore some files need to be replaced+0Install pytz   
-This fix also allows a more easy linkage to an already existing OpenMPI version on the system. +<code>python -m pip install pytz</code>  
- +
-1. Download the necessary files: ftp://ftp.gwdg.de/pub/misc/sphire/sphire_1_2/sphire_util_pydusa_fix_20190205.tar   +
- +
-2. Replace the utils folder with the downloaded one.   +
- +
-3. Continue with one of the two following steps [[downloads:sphire_1_2#existing_openmpi_installation| existing OpenMPI installation]] or [[downloads:sphire_1_2#reinstall_openmpi_might_be_necessary| Reinstall OpenMPI]]  +
  
 === Reinstall OpenMPI (Might be necessary) === === Reinstall OpenMPI (Might be necessary) ===
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   * On Mac Retina displays, problems with Qt: button size is larger, etc.   * On Mac Retina displays, problems with Qt: button size is larger, etc.
- 
downloads/sphire_1_2.txt · Last modified: 2019/09/27 10:02 by twagner