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cryolo_archive [2018/11/27 12:26]
twagner [General crYOLO network model] 		cryolo_archive [2019/03/14 13:42]
twagner [crYOLO boxmanager]
Line 2: Line 2:
  
 ==== crYOLO ==== ==== crYOLO ====
 +
 +=== Version: 1.2.3 ===
 +
 +Uploaded:  12. February 2019 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_2_3/cryolo-1.2.3.tar.gz|DOWNLOAD]]
 +
 +=== Version: 1.2.2 ===
 +
 +Uploaded:  21. December 2018 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_2_2/cryolo-1.2.2.tar.gz|DOWNLOAD]]
 +
 +=== Version: 1.2.1 ===
 +
 +Uploaded:  05. December 2018 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_2_1/cryolo-1.2.1.tar.gz|DOWNLOAD]]
 +
 +=== Version: 1.2.0 ===
 +
 +Uploaded:  27. November 2018 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_2_0/cryolo-1.2.0.tar.gz|DOWNLOAD]]
  
 === Version: 1.1.4 === === Version: 1.1.4 ===
Line 46: Line 62:
  
 ==== crYOLO boxmanager ==== ==== crYOLO boxmanager ====
 +
 +=== Version: 1.1.1 ===
 +
 +Uploaded: 21. December 2018 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_BM_V1_1_1/cryoloBM-1.1.1.tar.gz|DOWNLOAD]]
 +
 +=== Version: 1.1.0 ===
 +
 +Uploaded: 27. November 2018 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_BM_V1_1_0/cryoloBM-1.1.0.tar.gz|DOWNLOAD]]
 +
  
 === Version: 1.0.4 === === Version: 1.0.4 ===
Line 71: Line 96:
 ---- ----
  
 +==== General PhosaursNet model ===
 +
 +[[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_phosnet_20181221_loss0037.h5
 +|DOWNLOAD]] (Uploaded: 21. December 2018)  Number of datasets: 27 (real), 10 simulated, 10 particle free datasets on various grids
 +
 +<code json config.json>
 +    {
 +    "model" : {
 +        "architecture":         "PhosaurusNet",
 +        "input_size":           1024,
 +        "anchors":              [205,205],
 +        "max_box_per_image":    700,
 +        "num_patches":          1,
 +        "filter":               [0.1,"tmp_filtered"]
 +      }
 +    }
 +</code>
  
 ==== General model YOLO patched mode ==== ==== General model YOLO patched mode ====
 +
 +=== Version 20181127 ===
 +
 +
 +
 +[[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_yolo_20181127_1100.h5|DOWNLOAD]] (Uploaded: 27. November 2018) Number of datasets: 27 (real), 10 simulated, 10 particle free datasets on various grids
 +
 +<code json config.json>
 +{
 +    "model" : {
 +        "architecture":         "YOLO",
 +        "input_size":           1024,
 +        "anchors":              [205,205],
 +        "overlap_patches":      200,
 +        "max_box_per_image":    700,
 +        "num_patches":          2,
 +        "filter":               [0.1,"tmp_filtered"]
 +    }
 +}
 +</code>
  
 === Version 20180823 === === Version 20180823 ===
Line 138: Line 200:
 ==== General crYOLO network model ==== ==== General crYOLO network model ====
  
-====General crYOLO network model====+
 Number of real handpicked datasets included: 10 Number of real handpicked datasets included: 10
  
Line 145: Line 207:
 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_0_0/gmodel_cryolo_20180621_0734_loss_0102.h5|DOWNLOAD]]  [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_0_0/gmodel_cryolo_20180621_0734_loss_0102.h5|DOWNLOAD]] 
  
- +<code json config.json> 
-<code json config.json>​ +{ 
-  {  +    "model" : {
-    "​model"​ : {  +
         "​architecture": ​        "​crYOLO",​          "​architecture": ​        "​crYOLO",​
         "​input_size": ​          ​1024,​         "​input_size": ​          ​1024,​
         "​anchors": ​             [160,​160],​         "​anchors": ​             [160,​160],​
         "​max_box_per_image": ​   600          "​max_box_per_image": ​   600 
-    }   +    } 
-  }  +} 
-</​code>​ +</code>
  
 Info: Trained on cryo images, therefore negative stain will not work. Info: Trained on cryo images, therefore negative stain will not work.
cryolo_archive.txt · Last modified: 2019/10/15 16:41 by twagner

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