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cryolo_archive [2018/11/27 11:25]
twagner [General model YOLO patched mode]
cryolo_archive [2018/12/20 15:23]
twagner [General model YOLO patched mode]
Line 2: Line 2:
  
 ==== crYOLO ==== ==== crYOLO ====
 +
 +=== Version: 1.2.0 ===
 +
 +Uploaded:  27. November 2018 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_2_0/cryolo-1.2.0.tar.gz|DOWNLOAD]]
 +
  
 === Version: 1.1.4 === === Version: 1.1.4 ===
Line 74: Line 79:
 ==== General model YOLO patched mode ==== ==== General model YOLO patched mode ====
  
-=== Version 20180823 ===+=== Version 20181127 ===
  
-Number of real handpicked datasets included: 25  (+8 particle free datasets on various grids) 
  
  
 +[[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_yolo_20181127_1100.h5|DOWNLOAD]] (Uploaded: 27. November 2018) Number of datasets: 27 (real), 10 simulated, 10 particle free datasets on various grids
 +
 +[[pipeline:window:cryolo#configuration1 |Valid configuration file]]
 +
 +Info: Trained on cryo images, therefore negative stain will not work.
 +
 +=== Version 20180823 ===
  
 [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_yolo_20180823_0806_loss_0059.h5|DOWNLOAD]]  [[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO-GENERAL-MODELS/gmodel_yolo_20180823_0806_loss_0059.h5|DOWNLOAD]] 
-(Uploaded: 23. August 2018)+(Uploaded: 23. August 2018) Number of real handpicked datasets included: 25  (+8 particle free datasets on various grids)
  
 Compatible config: Compatible config:
Line 88: Line 99:
     "model" : {     "model" : {
         "architecture":         "YOLO",         "architecture":         "YOLO",
-        "input_size":           1024,+        "input_size":           768,
         "anchors":              [205,205],         "anchors":              [205,205],
         "max_box_per_image":    600,         "max_box_per_image":    600,
-        "num_patches":          2+        "overlap_patches":      200, 
 +        "num_patches":          3
     }     }
 } }
Line 140: Line 152:
  
 ==== General crYOLO network model ==== ==== General crYOLO network model ====
 +
 +
 +Number of real handpicked datasets included: 10
 +
 +Uploaded: 28. June 2018
 +
 +[[ftp://ftp.gwdg.de/pub/misc/sphire/crYOLO_V1_0_0/gmodel_cryolo_20180621_0734_loss_0102.h5|DOWNLOAD]] 
 +
 +<code json config.json>
 +{
 +    "model" : {
 +        "​architecture": ​        "​crYOLO",
 +        "​input_size": ​          ​1024,​
 +        "​anchors": ​             [160,​160],
 +        "​max_box_per_image": ​   600 
 +    }
 +}
 +</code>
 +
 +Info: Trained on cryo images, therefore negative stain will not work.
cryolo_archive.txt · Last modified: 2019/10/15 16:41 by twagner