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--- cinderella_micrographs [2019/12/10 09:06]
twagner
+++ cinderella_micrographs [2019/12/10 09:18]
twagner [Classify]
@@ Line 1: / Line 1: @@
 ====== How to use SPHIRE's Cinderella for micrograph selection ======
-This tutorial describes how to use Cinderella to sort micrographs. Unfortunately, we cannot provide a pretrained model yet. Therefore the first step is to train a model (see section //Training//) and to apply a model (see section //Classify//)
+This tutorial describes how to use Cinderella to sort micrographs. Unfortunately, we cannot provide a pretrained model yet. Therefore the first step is to train a model (see section //Training//) and to apply a model (see section //Classify//).
@@ Line 55: / Line 55: @@
 ==== Classify ====
-Suppose you want to separate good and bad classes in folder ''micrographs'' and you want to save a list with the filenames of the good / bad micrographgs into the folder ''output_folder''. Furthermore you want to use the model ''my_model.h5'' and the GPU with ID=1. Micrographs with a confidence bigger than 0.5 should be classified as good micrograph.
+Suppose you want to separate good and bad micrographs in the folder ''micrographs'' and you want to save a list with the filenames of the good / bad micrographgs into the folder ''output_folder''. Furthermore you want to use the model ''my_model.h5'' and the GPU with ID=1. Micrographs with a confidence bigger than 0.5 should be classified as good micrograph.
 This is the command to run:

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